Do you think GNOME has similar UI issues? In my view, it's "pretty", but just doesn't let me configure it the way I want it to without hacking around way too much.
I ended up installing Dash To Dock and Ubuntu App Indicator Icons when I was using it and I ended up with something decent. I also usually have to faff around in the gnome tweaks tool to get the old "legacy" apps and the new apps looking consistent.